Browse of TCMCG018C22341 protein

CDS

Accession Number	TCMCG018C22341
gbkey	CDS
Protein Id	XP_031737593.1
Location	complement(join(26594880..26595487,26596662..26597033,26597410..26598511,26598604..26598899,26600103..26600181,26600328..26600415,26605272..26605422,26605494..26605761,26606084..26607394,26607942..26608166,26609242..26609482,26610685..26610744,26612664..26612987,26613085..26613163,26613570..26613649,26613726..26613803,26614460..26614540,26614621..26614708,26614929..26615015,26615109..26615248,26615352..26615425,26616183..26616206))
Gene	LOC101213597
GeneID	101213597
Organism	Cucumis sativus

Protein

Length	1951aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA182750
db_source	XM_031881733.1
Definition	mediator of RNA polymerase II transcription subunit 13 isoform X1 [Cucumis sativus]

EGGNOG-MAPPER Annotation

COG_category	K
Description	Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K15164        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko04919        [VIEW IN KEGG] map04919        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0005215        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0006810        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008643        [VIEW IN EMBL-EBI] GO:0015144        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016021        [VIEW IN EMBL-EBI] GO:0022857        [VIEW IN EMBL-EBI] GO:0031224        [VIEW IN EMBL-EBI] GO:0034219        [VIEW IN EMBL-EBI] GO:0040034        [VIEW IN EMBL-EBI] GO:0044425        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050793        [VIEW IN EMBL-EBI] GO:0051119        [VIEW IN EMBL-EBI] GO:0051179        [VIEW IN EMBL-EBI] GO:0051234        [VIEW IN EMBL-EBI] GO:0051239        [VIEW IN EMBL-EBI] GO:0055085        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0071702        [VIEW IN EMBL-EBI] GO:0090213        [VIEW IN EMBL-EBI] GO:2000026        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGTGGACGAATATTTTCAAAATTGGTGGTCTACATCAAATATCATGGTTCCAGTTTCTTCCTAACGAATCTGATTTGATTACCTTACCAGACAAAAGTGCGAAGGTTGAGCACAATGATGCTGCCACATTCTTGGTTCTTTCATCACATGTGCAATTACAGAAGGAAGGATTTCTAAGTACTTGGACCAACTCATTTGTAGGGCCTTGGGACCCATCTCAGGGCTTGCACAATCCTGATGAGAAAATTAAACTCTGGCTTTTTCTACCTGGACGCCATTCTTCTGTCGTTGAAACTGCTCAAGCAGCTGTTTCCAAGTTAAGGGTTGTTGCATCTGGACTGTGGATCTCTCCTGGAGATTCAGAGGAGGTTGCGGCTGCCCTTTCTCAGGCATTACGAAATTGTATCGAAAGAGCCCTAACTGGACTTTCATACATGCGGTTTGGAGATGTCTTCACAAAATATCACCACATGCAAAGTGAAGAATTATTCAGGAGAGGGCAACCTACAATGGAGTTCATATTTGCTGCTACCGAGGAGGCAATCTTTGTGCATGTCATTTTATCTGCAAAACATATTCGAGCACTATCAAGTGCCGAGATTGAAAGAGTTTTGAAGAATTCTGCTCATAATTCCTGTCTTGGACTTCCAGTGATTGTTTCGCCTCATGGAATTCGAGGTAGGTTTACTGGGTGTTGTGCCAGTGATGTTGTAAAACGGATATATTCCAGTTCTGGCAAGTCTAGGACTTCATACGGATTTGTAGGTTTACCTCATCATGTCTCTCAAGGTGGCTGCCAGTTAAAGGGGCAAAATTGCTATGTCGAAGTTACCCTAGGGTGCCCTAAATCAATGAGTGAGAAGCCACTGCAATCTAATTCAAATTACACAAAAAATGTATCAATGCCTCAAGTTACAGAATCTCTTACCGGACGAGGTGATCTGAAAGGATCGTCAAACCATTTATCTTCTCATAAAAAGACTTTCATATATCCATCAGAGGCAGTGCTTGTTTTGTTATTGCAAACATCGTTTGCCAGGTCTTCTTTGAAAAGATTTTGGCTGCAAAATTGGATAGGACCCTCATTACCTGGTTCATCTTTCAACGTGCATTGTGCTGGAAATGTAGATTATATGGAAGGGTTGTGGACTGAGACTGATAAAATACGTTCACAGCATGGTTATGATAGCAGCAGCAATAGTAACAGTAGCAGCATTGCTAGCATAAGCAGTAGTTCTAATGATAGTGATTGCAAGACAGGAGCCAGCGAACTTGAAGCAGATGCTGATTCCTTATCTTGCAGGCAGTCTGGATTGTCTTCAAATGACCAATCCGCAATCAGTTCCAGAAAATTGGGTATGAAGCGGCCTCGTTCGGGGATGCCAGATGCATTAGATCAAATGGGTACAGGTGCTCAAATTCAAGATGCTTTCAAATCTGATTTTACTTCCACTGAGCTGATTGGATCTCCTTGGGACTGGGAAGACGATGACCGGGGTGGGGACGACATAGAAGACCTCCTTTTGCATTTTGGGGGCTTTGGAGACTTCTTTGAGAATGACGTTTTACCTTTTGGGGAGCCTCCAGGAACTACAGAGTCACAATCTCTTATGTTTTCTGCTCCGGACTACACTGATGTAGGTAGCAGTCCAGTTGTGGTCATGGATGTTTCCGATCAGATGCTTTTACCTGTGGGGTTTCCATCCTTTGATAGCTTCAACCCAGCTGTTCCAATGACGACAGAGGAGGTTCTAAGCAAAGATCACGAAGTCACAAACAATGCATTGTCCTCAGTAACAGCCAACCAAACCCCAGTGTCTTCTTCTGGGGAGTTTGATCAAATCACTAAAGCTGAAGCTCTGATGACACTTGCTCCCGAATATGGAGCAGTTGAAACTCCTACAAGTGAGTTCTCTTCATCAATGTTTCGAAGTCCATATATTCCAAAAACTCGGGAGCTAGAGAGTTCAAACTTAAGCACAAACAGTTACATATATGGTGCAACACCACCCTCCTCACCACATTTTGATAGGTCCGATGAGAAGAGTGGTATATCTTCAAATACAAAACCATCTAATGTTTTACGGGCAAAAAATTATTATATACATGTTGACAATGTGAAAGAGAAACATATAAGAAAATCAGCTCCCTCTAAGAATAGCATCTCTACATCTGATGGGCTGGCATCATCTCTTTCGAATCACAATGCTGTCAAAACCACACAAAGGAAAACGACGGAGGACAGTGTCGAAGCTGATTGTTTATTTATGTCTCAGAAGCACGTTCTTGCGATGGAAGTCGAATGCTTAATGTTCCAAGCTTCTATGTGCAGATTACGACACACCTTGCAGTCGTCTGGTAGTTCCACAGTTTCTGGTACAACTCAGCTATCTAGTGATCCAAGTACTATTACAGACTATATGGCAAATGAGGTGAAGAAGAAGGATACTAGTGTTCCAATTAGAATAGCCGGAGAAGCTGATGGGGGAATACTTGATGGACACCTTAATGCACCTGTTGGTGTTTGGCGGTCTGTTGGAGTTCCCAAGGTTCCAAAGCCGTCAAACTCACCTAGTATGGAACTTGGGTCATCCTTACCCCACAATTCTTTTCATGAGGATGGAGTTCTCTCTTATGGGCAGAGACAACCACTTCAGGAGCTCCTTGATGCCTTCCCTTTAATTGTCCAGCAGGCTACTTCTTTTGTTGACCTTGCCTTGGATGCAGAATGTGGCGATGGGCCATATGGCTGGCTAGCATTACAGGAACAATGGAGGAGGGGATTTTCATGTGGGCCATCAATGGTTCATGCAGGCTGTGGAGGGACCTTAGCCTCTTGCCATGCGTTGGACATTGCAGGTGTTGAGTTAGTGGATCCTCTCACTGCTGATGTTTATGCCCCGTCTGTAATGAGTTTGCTGCAGTCTGACATGAAAACAGCCTTGAAATCTGCATTTGGCACTTTGGATGGGCCATTATCTGTAATTGATTGGTGCAAAGGTCGTGGCCAATTAGGTGATTCAGGAAGCACGGGTGATGGATTATCTGCCGAGTCTATTGTAAATGAATCTAAAGATTCTTCAAGTACTGTTATGCAAAATATTGGAGAGCCCTTAAGCCCGTCACATTCTTCTGCTAGTGGATCGTCTAGTCTCAAAGGTAGTACCACGATGGATGGTTCCAAAATGGATGAGACTTCCCAAAGGAGATCAAACCAAGAGATTTGCAGTTCAGGATCTGACCAACAACTACTTCCTTTGCGGCTGAGACCAACAGTTCTTCTTCTCCCATCACCTGCAATACTTGTTGGGTACCAAGATGATTGGCTTAAGACATCTGCCAACTCTCTGCAACTTTGGGAAAAGGCCCCTCTTGAACCTTATGCTGTACAAAAACCGATAAATTACTGCGTCATTTGCCCAGATATTGATCCTCTTGCATCAGCTGCTGCTGATTTTTTCCAGCAACTAGGAACGGTGTACGAGACATGCAAGCTGGGAACTCATACCCCGCATAATTTAGGGAATCAAATGGACACAGAGTCTGGGAAGTGGTTGTCTTCAGGTTTTGTTCTACTTGATTGCCCCCAATCAATGAAAATTGACAGCAGCAGTGCTTCAATTGTTGGTTCAATTAGTGACTATTTGCTCTCTCTCTCAAATGGATGGGACTTGACAAGTTATCTTAGATCTCTTTCAAAAGCTTTGAAAGCTTTGAAACTCTCTCCATCCATGTCAGCTAATCCAAAAGAAGGAAGTAATGGTTCTTGCATGGTACTTTATGTGATATGCCCTTTTCCCGATCCCCTGGAAGTATTGCAAACTGTTGTTGAATCTTCTGTTGCTGTTGGTTCTGTCATGCTCCAGTCAGATAGAGATAGAAGAACAATATTGTGTAGTCAGGTTGCGAAGTCGTTAAGCTGCTCAGCAGCTGTTGATGAGTCTTCAGCATCGAACGTTTTAGTTCTTCAAGGGTTTACTCTACCTAAATTGGTGTTGCAGATTGTGACAGTTGATGTGATTTTCAGAGTGAGTAGTCCATCCGTAAATGAACTTGTCATTCTTAAGGAAACAGCTTTTACTATTTATAACAAGGCTCGTCGAATATCACGGGGGACATCAAATGATGCTGCCCAGTCATCATCATTATCTAGTAGATCTCATTCAGTTCTATCATCAATGTCACCTTCTATTCCAGGGATGTGGAAGGACTGTGTTGGTCCTAGAATGACTGGTCATTCCCTCCCACGAGAGGGTGAAATTGATGGTACCCTGAGGTCTGGAAACTGGGATAATTCCTGGCAATCAAGGGCTGGAACATTAAATTGTGATCCAAACCGAATAGGAGAATATTATCTTCAAGATGATTCTTGCTACATGTTTGAACCACTTTTTATCCTGGCAGAACCTGGTTCACTAGAGCATGGAGTTTCACCAATAAATCCTGTTACACTAGGAACAGAGTCTTCAAAACCATTATCTGATGACAACAGCGGAGCCTTTTTACAGGGTACAAATTCAACAGTAGGTATGGATATGGGATCTAACTCTCAACTAGATGGGCCTGAGATGGATGGCTTTGGATGTGGCCATCAGAAGAACCCTAGTCTACACTGTTCCTATGGATGGACAGAAGATTGGCGCTGGCTAGTATGTATCTGGACAGATTCGCGAGGAGAATTGTTAGACAGCCATACATTTCCATTTGGAGGTATCAGCAGCAGGCAGGATACGAAGGGTCTGGAGTGCATTTTTGTCCAAGTTCTGCAGCAAGGCTGTATGATACTTCAGTCATGTTCACCTGATACTGGTGTCTCCAAGCCAAGGGACTTGGTTATTGCAAGAATTGGAATGTTCTATGAACTTGAGTATCTAGAGTGGCAGAAGGCCATTTACTCACTATGGGGATCTGAGGTGAAAAAATGGCCCTTGCAACTTCGCCGCTGCATGCCAGATGGGATATCATCAAGTACTAATGGGAGTTCCTTGCAACAACAAGAGATGAGTTTGATACATGATAGAAACCTACCCTCCTCCCCAAATCCTTTATATAGCCCGCATTCAAAAACCACAGGCTTTATGAAAGCTGGTATTGGACAACCTGCTATTAGAAAACAGCTAATGGGTGGTCATGCAGTCGTTGACAACTCAAGAGGGTTGATTCAGTGGGTGCATAGTATTAGTTTCGTTGCAGTTTCGATGGAGCATTCTCTTCAGCTATTACTTCAAGCTGATTCAGCATCTCCTGGTGGAAATCAAGGCAGTGTACACACGGGTTCGTCCATGTATATTGAAGGCTTTACCCCTGTAAAGTCACTTGGTTCCACATCTTCTTCTTATATACTAATCCCATCACCCAGTCTGCGTTTCCTTCCCTCTAACCCTCTTCAGCTTCCCACATGCCTCACGGCCGAATCCCCACCTTTAGCACATCTCCTACACAGTAAGGGCTCTGCAGTTCCACTTTCGACTGGATTTGCTATTTCAAGAGCTGTACCCTCAATGAGAAAGGATTCTCGAAGCAACATGAAAGAGGAATGGCCATCAGTCCTTTCGGTTAGTCTCATTGATTATTACGGAAACAATATCACACAAGAAAAGAATGTCCGCGGAGTTATCAAGCAAGTGGGAAGAAGTTCAACTGTCGAATCCAGAGACTTTGAAATAGAGACACATTTGATCCTTGAATCCATCATAGCAGAGCTTCATGCCTTATCATGGATGACTGTGAGCCCAGCATACTTGGACCGGCGAACTGCACTGCCTTTTCACTGTGATATGGTTTTAAGACTCCGAAGGATTCTTCATTTTGCTGACACGGAGCTCTCTAGGCGCGCTGAAAAAACGAAACGTTAG

Protein:   MWTNIFKIGGLHQISWFQFLPNESDLITLPDKSAKVEHNDAATFLVLSSHVQLQKEGFLSTWTNSFVGPWDPSQGLHNPDEKIKLWLFLPGRHSSVVETAQAAVSKLRVVASGLWISPGDSEEVAAALSQALRNCIERALTGLSYMRFGDVFTKYHHMQSEELFRRGQPTMEFIFAATEEAIFVHVILSAKHIRALSSAEIERVLKNSAHNSCLGLPVIVSPHGIRGRFTGCCASDVVKRIYSSSGKSRTSYGFVGLPHHVSQGGCQLKGQNCYVEVTLGCPKSMSEKPLQSNSNYTKNVSMPQVTESLTGRGDLKGSSNHLSSHKKTFIYPSEAVLVLLLQTSFARSSLKRFWLQNWIGPSLPGSSFNVHCAGNVDYMEGLWTETDKIRSQHGYDSSSNSNSSSIASISSSSNDSDCKTGASELEADADSLSCRQSGLSSNDQSAISSRKLGMKRPRSGMPDALDQMGTGAQIQDAFKSDFTSTELIGSPWDWEDDDRGGDDIEDLLLHFGGFGDFFENDVLPFGEPPGTTESQSLMFSAPDYTDVGSSPVVVMDVSDQMLLPVGFPSFDSFNPAVPMTTEEVLSKDHEVTNNALSSVTANQTPVSSSGEFDQITKAEALMTLAPEYGAVETPTSEFSSSMFRSPYIPKTRELESSNLSTNSYIYGATPPSSPHFDRSDEKSGISSNTKPSNVLRAKNYYIHVDNVKEKHIRKSAPSKNSISTSDGLASSLSNHNAVKTTQRKTTEDSVEADCLFMSQKHVLAMEVECLMFQASMCRLRHTLQSSGSSTVSGTTQLSSDPSTITDYMANEVKKKDTSVPIRIAGEADGGILDGHLNAPVGVWRSVGVPKVPKPSNSPSMELGSSLPHNSFHEDGVLSYGQRQPLQELLDAFPLIVQQATSFVDLALDAECGDGPYGWLALQEQWRRGFSCGPSMVHAGCGGTLASCHALDIAGVELVDPLTADVYAPSVMSLLQSDMKTALKSAFGTLDGPLSVIDWCKGRGQLGDSGSTGDGLSAESIVNESKDSSSTVMQNIGEPLSPSHSSASGSSSLKGSTTMDGSKMDETSQRRSNQEICSSGSDQQLLPLRLRPTVLLLPSPAILVGYQDDWLKTSANSLQLWEKAPLEPYAVQKPINYCVICPDIDPLASAAADFFQQLGTVYETCKLGTHTPHNLGNQMDTESGKWLSSGFVLLDCPQSMKIDSSSASIVGSISDYLLSLSNGWDLTSYLRSLSKALKALKLSPSMSANPKEGSNGSCMVLYVICPFPDPLEVLQTVVESSVAVGSVMLQSDRDRRTILCSQVAKSLSCSAAVDESSASNVLVLQGFTLPKLVLQIVTVDVIFRVSSPSVNELVILKETAFTIYNKARRISRGTSNDAAQSSSLSSRSHSVLSSMSPSIPGMWKDCVGPRMTGHSLPREGEIDGTLRSGNWDNSWQSRAGTLNCDPNRIGEYYLQDDSCYMFEPLFILAEPGSLEHGVSPINPVTLGTESSKPLSDDNSGAFLQGTNSTVGMDMGSNSQLDGPEMDGFGCGHQKNPSLHCSYGWTEDWRWLVCIWTDSRGELLDSHTFPFGGISSRQDTKGLECIFVQVLQQGCMILQSCSPDTGVSKPRDLVIARIGMFYELEYLEWQKAIYSLWGSEVKKWPLQLRRCMPDGISSSTNGSSLQQQEMSLIHDRNLPSSPNPLYSPHSKTTGFMKAGIGQPAIRKQLMGGHAVVDNSRGLIQWVHSISFVAVSMEHSLQLLLQADSASPGGNQGSVHTGSSMYIEGFTPVKSLGSTSSSYILIPSPSLRFLPSNPLQLPTCLTAESPPLAHLLHSKGSAVPLSTGFAISRAVPSMRKDSRSNMKEEWPSVLSVSLIDYYGNNITQEKNVRGVIKQVGRSSTVESRDFEIETHLILESIIAELHALSWMTVSPAYLDRRTALPFHCDMVLRLRRILHFADTELSRRAEKTKR